EnhancerDB
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  3. rs546820841[chr1:202048536]
Enhancers that have rs546820841[chr1:202048536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs546820841[chr1:202048536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 21366478
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 107857652
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 21366484
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 107857654
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 21366534
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 107857714
chr1 202047899 202048656 ZNF274 GTRD no Liver (HepG2) 21366692
chr1 202048534 202048549 FOXP1 JASPAR yes 34550671
Genes associated with rs546820841[chr1:202048536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More