EnhancerDB
  1. Home
  2. SNP
  3. rs546826682[chr17:53526996]
Enhancers that have rs546826682[chr17:53526996]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs546826682[chr17:53526996]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53526988 53526999 USF1 JASPAR yes 54852521
chr17 53526991 53527009 RARA JASPAR yes 54852522
Genes associated with rs546826682[chr17:53526996], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More