EnhancerDB
  1. Home
  2. SNP
  3. rs546830415[chr17:80258109]
Enhancers that have rs546830415[chr17:80258109]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs546830415[chr17:80258109]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 21799382
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 108311917
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 21799383
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 108311918
chr17 80256422 80258239 ZBTB33 GTRD no Lung (A549) 108311920
chr17 80257182 80258247 ZNF274 GTRD no Bone Marrow (K562) 21799398
chr17 80257307 80258344 ZNF274 GTRD no Cervix (HeLa-S3) 21799402
chr17 80257533 80258246 ZNF274 GTRD no Bone Marrow (K562) 21799406
chr17 80257541 80258118 ZNF274 GTRD no Bone Marrow (K562) 21799407
chr17 80257593 80258266 ZNF274 GTRD no Bone Marrow (K562) 21799408
chr17 80257665 80258228 ZNF274 GTRD no Bone Marrow (K562) 21799410
chr17 80257694 80258172 ZNF274 GTRD no Blood (GM12878) 21799411
chr17 80257694 80260498 ZNF274 GTRD no Blood (GM12878) 21799412
chr17 80257716 80258198 ZNF274 GTRD no Bone Marrow (K562) 21799413
chr17 80257725 80258178 ZNF274 GTRD no Bone Marrow (K562) 21799414
chr17 80257752 80258148 ZNF274 GTRD no Bone Marrow (K562) 21799415
chr17 80257804 80258228 ZNF274 GTRD no Cervix (HeLa-S3) 21799416
chr17 80257840 80258181 ZNF143 GTRD no Epithelial (MCF-7) 21799417
chr17 80258097 80258109 TEAD1 JASPAR yes 56360144
chr17 80258109 80258114 ETS2 TRANSFAC yes 56360145
Genes associated with rs546830415[chr17:80258109], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More