EnhancerDB
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  3. rs546860735[chr2:69056412]
Enhancers that have rs546860735[chr2:69056412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69053005 69068635 enh5634
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 69056301 69056845 vista31934
VISTA
Transcript factors that have rs546860735[chr2:69056412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69056137 69057169 POLR2A UCSC Txn Factor no Conserved 108432850
chr2 69056381 69056777 MAX UCSC Txn Factor no Conserved 108432851
chr2 69056406 69056673 GATA2 UCSC Txn Factor no Conserved 108432852
chr2 69056409 69056660 FOXP2 UCSC Txn Factor no Conserved 108432853
chr2 69056411 69056421 RELA JASPAR yes 22076970
chr2 69056411 69056421 REL JASPAR yes 22076971
chr2 69056411 69056421 RELA JASPAR yes 74801050
chr2 69056411 69056421 REL JASPAR yes 74801051
chr2 69056411 69056422 NFKB1 JASPAR yes 22076972
chr2 69056411 69056422 NFKB1 JASPAR yes 74801052
chr2 69056412 69056422 NFKB1 JASPAR yes 22076973
chr2 69056412 69056422 NFKB1 JASPAR yes 74801053
Genes associated with rs546860735[chr2:69056412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More