EnhancerDB
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  3. rs546936199[chr6:17716927]
Enhancers that have rs546936199[chr6:17716927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs546936199[chr6:17716927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17716923 17716931 CREB1 JASPAR yes 100396220
chr6 17716926 17716937 HOXA10 JASPAR yes 100396221
chr6 17716926 17716937 HOXC11 JASPAR yes 100396222
chr6 17716926 17716937 HOXD12 JASPAR yes 100396223
chr6 17716926 17716942 POU4F2 JASPAR yes 100396224
chr6 17716926 17716942 POU4F3 JASPAR yes 100396225
chr6 17716927 17716936 CDX1 JASPAR yes 100396226
chr6 17716927 17716937 HOXC10 JASPAR yes 100396227
chr6 17716927 17716937 HOXD11 JASPAR yes 100396228
chr6 17716927 17716943 POU4F2 JASPAR yes 100396229
chr6 17716927 17716943 POU4F3 JASPAR yes 100396230
Genes associated with rs546936199[chr6:17716927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More