EnhancerDB
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  3. rs546946779[chr15:63531609]
Enhancers that have rs546946779[chr15:63531609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 63519385 63541692 enh16222
Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546946779[chr15:63531609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 63531603 63531624 IRF1 JASPAR yes 23963606
chr15 63531605 63531620 STAT2 JASPAR yes 23963607
chr15 63531606 63531627 IRF1 JASPAR yes 23963608
chr15 63531607 63531628 IRF1 JASPAR yes 23963609
chr15 63531608 63531623 FOXP1 JASPAR yes 23963610
chr15 63531608 63531629 IRF1 JASPAR yes 23963611
chr15 63531609 63531624 FOXP1 JASPAR yes 23963612
chr15 63531609 63531630 IRF1 JASPAR yes 23963613
Genes associated with rs546946779[chr15:63531609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More