EnhancerDB
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  3. rs546960580[chr7:105409164]
Enhancers that have rs546960580[chr7:105409164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 105407025 105425424 enh24394
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Lung (PC-9) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs546960580[chr7:105409164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 105409157 105409172 PRDM1 JASPAR yes 16972794
chr7 105409157 105409173 SOX4 JASPAR yes 16972795
chr7 105409158 105409173 SOX21 JASPAR yes 16972796
chr7 105409162 105409168 TCF4 TRANSFAC yes 16972797
Genes associated with rs546960580[chr7:105409164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More