EnhancerDB
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  3. rs546995050[chr17:35278819]
Enhancers that have rs546995050[chr17:35278819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 35273515 35283435 enh32181
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Stomach Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs546995050[chr17:35278819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 35278241 35278911 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21751662
chr17 35278627 35279231 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21751663
chr17 35278634 35279158 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21751664
chr17 35278696 35279172 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21751665
chr17 35278714 35279316 TCF7L2 GTRD no Colon (HCT116) 21751666
chr17 35278754 35279067 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21751667
chr17 35278772 35279087 ZNF143 GTRD no Epithelial (MCF-7) 21751668
chr17 35278781 35279483 TCF7L2 GTRD no Colon (HCT116) 21751669
chr17 35278784 35279416 TCF7L2 GTRD no Colon (HCT116) 21751670
chr17 35278805 35279169 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21751671
chr17 35278819 35278831 DBP JASPAR yes 54053154
Genes associated with rs546995050[chr17:35278819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More