EnhancerDB
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  3. rs547349949[chr1:115709828]
Enhancers that have rs547349949[chr1:115709828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115706465 115714135 enh12174
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs547349949[chr1:115709828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 21330708
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823458
chr1 115709561 115715466 ZNF143 GTRD no Epithelial (MCF-7) 107823459
chr1 115709816 115709831 FOXA1 JASPAR yes 31713335
chr1 115709817 115709832 FOXP1 JASPAR yes 31713336
chr1 115709818 115709829 FOXP2 JASPAR yes 31713337
chr1 115709818 115709830 FOXC2 JASPAR yes 31713338
chr1 115709818 115709832 FOXF2 JASPAR yes 31713339
chr1 115709819 115709830 FOXB1 JASPAR yes 31713343
chr1 115709819 115709830 FOXC1 JASPAR yes 31713344
chr1 115709820 115709831 FOXA1 JASPAR yes 31713351
Genes associated with rs547349949[chr1:115709828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More