EnhancerDB
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  3. rs547393326[chr1:228073858]
Enhancers that have rs547393326[chr1:228073858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs547393326[chr1:228073858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228072370 228074595 TCF7L2 GTRD no Colon (HCT116) 107876769
chr1 228072579 228074663 TCF7L2 GTRD no Colon (HCT116) 107876772
chr1 228072843 228074594 TCF7L2 GTRD no Colon (HCT116) 107876773
chr1 228072913 228074553 TCF7L2 GTRD no Colon (HCT116) 107876774
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 21388236
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 107876775
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 21388237
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 107876777
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 21388238
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 107876778
chr1 228073280 228074467 ZNF274 GTRD no Bone Marrow (K562) 21388240
chr1 228073361 228073877 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388242
chr1 228073477 228074589 ZNF143 GTRD no Epithelial (MCF-7) 21388246
chr1 228073493 228074463 ZNF274 GTRD no Bone Marrow (K562) 21388249
chr1 228073499 228074601 ZNF143 GTRD no Epithelial (MCF-7) 21388251
chr1 228073551 228074394 ZNF274 GTRD no Bone Marrow (K562) 21388253
chr1 228073598 228074355 ZNF274 GTRD no Cervix (HeLa-S3) 21388255
chr1 228073654 228074230 ZNF274 GTRD no Bone Marrow (K562) 21388256
chr1 228073654 228074259 ZNF274 GTRD no Bone Marrow (K562) 21388257
chr1 228073693 228074496 ZNF143 GTRD no Epithelial (MCF-7) 21388258
chr1 228073724 228074379 ZNF274 GTRD no Bone Marrow (K562) 21388259
chr1 228073725 228074432 ZNF274 GTRD no Bone Marrow (K562) 21388260
chr1 228073738 228074786 ZNF274 GTRD no Bone Marrow (K562) 21388261
chr1 228073783 228074332 ZNF274 GTRD no Bone Marrow (K562) 21388262
chr1 228073787 228074239 ZNF274 GTRD no Bone Marrow (K562) 21388263
chr1 228073789 228074234 ZNF274 GTRD no Bone Marrow (K562) 21388264
chr1 228073789 228074361 ZNF143 GTRD no Epithelial (MCF-7) 21388265
chr1 228073795 228074241 ZNF143 GTRD no Epithelial (MCF-7) 21388266
chr1 228073803 228074296 ZNF274 GTRD no Bone Marrow (K562) 21388267
chr1 228073807 228074259 ZNF274 GTRD no Cervix (HeLa-S3) 21388268
chr1 228073843 228074224 ZNF274 GTRD no Cervix (HeLa-S3) 21388269
chr1 228073845 228073859 GLIS2 JASPAR yes 35890463
chr1 228073852 228073866 PLAG1 JASPAR yes 35890464
chr1 228073855 228073859 LFA1 TRANSFAC yes 35890465
Genes associated with rs547393326[chr1:228073858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More