EnhancerDB
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  3. rs547538778[chr16:85490461]
Enhancers that have rs547538778[chr16:85490461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547538778[chr16:85490461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85488334 85492516 ZNF143 GTRD no Epithelial (MCF-7) 21726100
chr16 85489197 85490806 ZNF143 GTRD no Epithelial (MCF-7) 21726102
chr16 85489221 85490810 ZNF143 GTRD no Epithelial (MCF-7) 21726103
chr16 85489832 85492259 ZNF274 GTRD no Bone Marrow (K562) 21726105
chr16 85489843 85490796 ZNF143 GTRD no Epithelial (MCF-7) 21726106
chr16 85489890 85491954 ZNF274 GTRD no Bone Marrow (K562) 21726107
chr16 85489969 85493433 ZNF143 GTRD no Epithelial (MCF-7) 21726108
chr16 85489998 85493211 ZNF143 GTRD no Epithelial (MCF-7) 21726109
chr16 85490086 85490848 ZNF143 GTRD no Epithelial (MCF-7) 21726110
chr16 85490088 85490615 ZNF143 GTRD no Epithelial (MCF-7) 21726111
chr16 85490149 85491367 ZNF143 GTRD no Epithelial (MCF-7) 21726112
chr16 85490254 85493453 ZNF143 GTRD no Epithelial (MCF-7) 21726113
chr16 85490279 85492311 ZBTB33 GTRD no Lung (A549) 21726114
chr16 85490373 85492989 ZNF143 GTRD no Epithelial (MCF-7) 21726115
chr16 85490409 85492804 ZNF274 GTRD no Bone Marrow (K562) 21726116
chr16 85490440 85491927 ZBTB33 GTRD no Lung (A549) 21726117
chr16 85490452 85490468 ZNF143 JASPAR yes 12063636
chr16 85490460 85490465 SP1 TRANSFAC yes 12063637
Genes associated with rs547538778[chr16:85490461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More