EnhancerDB
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  3. rs547614172[chr2:238347759]
Enhancers that have rs547614172[chr2:238347759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547614172[chr2:238347759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238347749 238347761 PKNOX1 JASPAR yes 82109240
chr2 238347749 238347761 TGIF1 JASPAR yes 82109241
chr2 238347749 238347764 SCRT1 JASPAR yes 82109242
chr2 238347750 238347760 FIGLA JASPAR yes 82109243
chr2 238347750 238347760 ID4 JASPAR yes 82109244
chr2 238347750 238347760 TCF3 JASPAR yes 82109245
chr2 238347750 238347760 TCF4 JASPAR yes 82109246
chr2 238347751 238347760 SNAI2 JASPAR yes 82109247
chr2 238347758 238347761 MYB TRANSFAC yes 82109249
chr2 238347758 238347772 NR2F1 JASPAR yes 82109250
Genes associated with rs547614172[chr2:238347759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More