EnhancerDB
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  3. rs547854116[chr17:45952800]
Enhancers that have rs547854116[chr17:45952800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 45938065 45965315 enh17194
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs547854116[chr17:45952800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 45952754 45953353 P63 GTRD no Skin (Keratinocyte) 108267557
chr17 45952789 45952800 TFAP2A JASPAR yes 54544628
chr17 45952789 45952800 TFAP2B JASPAR yes 54544629
chr17 45952789 45952800 TFAP2C JASPAR yes 54544630
chr17 45952789 45952802 TFAP2A JASPAR yes 54544631
chr17 45952789 45952802 TFAP2B JASPAR yes 54544632
chr17 45952789 45952802 TFAP2C JASPAR yes 54544633
chr17 45952793 45952806 NFKB1 JASPAR yes 54544635
chr17 45952794 45952805 NFKB1 JASPAR yes 54544636
chr17 45952796 45952801 SP1 TRANSFAC yes 54544637
chr17 45952798 45952813 ZIC3 JASPAR yes 54544638
Genes associated with rs547854116[chr17:45952800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More