EnhancerDB
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  3. rs547968560[chr17:4135107]
Enhancers that have rs547968560[chr17:4135107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4130913 4138615 enh16936
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (T-cell) Bone (Osteoblast) Lung (PC-9) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs547968560[chr17:4135107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4135096 4135112 T JASPAR yes 52821688
chr17 4135100 4135108 TBX5 JASPAR yes 52821689
chr17 4135100 4135109 ZEB1 JASPAR yes 52821690
chr17 4135100 4135115 SCRT1 JASPAR yes 52821691
chr17 4135101 4135111 FIGLA JASPAR yes 52821692
chr17 4135101 4135111 ID4 JASPAR yes 52821693
chr17 4135101 4135111 TCF3 JASPAR yes 52821694
chr17 4135101 4135111 TCF4 JASPAR yes 52821695
chr17 4135102 4135111 SNAI2 JASPAR yes 52821696
chr17 4135103 4135108 USF2 TRANSFAC yes 52821697
chr17 4135105 4135117 ZBTB7A JASPAR yes 52821698
Genes associated with rs547968560[chr17:4135107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More