EnhancerDB
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  3. rs548027037[chr1:12214352]
Enhancers that have rs548027037[chr1:12214352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs548027037[chr1:12214352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12214342 12214363 IRF1 JASPAR yes 26804257
chr1 12214344 12214359 IRF9 JASPAR yes 26804258
chr1 12214345 12214359 IRF7 JASPAR yes 26804259
chr1 12214347 12214359 IRF1 JASPAR yes 26804260
chr1 12214352 12214361 SRY JASPAR yes 26804261
Genes associated with rs548027037[chr1:12214352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More