EnhancerDB
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  3. rs548070297[chr1:200987511]
Enhancers that have rs548070297[chr1:200987511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200981245 200991765 enh12515
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Lung (A549) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs548070297[chr1:200987511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200986571 200987540 ZNF143 GTRD no Epithelial (MCF-7) 107855843
chr1 200986636 200987572 ZNF143 GTRD no Epithelial (MCF-7) 107855844
chr1 200987511 200987526 RFX5 JASPAR yes 34478282
Genes associated with rs548070297[chr1:200987511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More