EnhancerDB
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  3. rs548115892[chr17:29910520]
Enhancers that have rs548115892[chr17:29910520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29902607 29916333 enh17096
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs548115892[chr17:29910520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29910054 29911000 ZNF143 GTRD no Epithelial (MCF-7) 21750170
chr17 29910079 29910937 ZNF143 GTRD no Epithelial (MCF-7) 21750171
chr17 29910101 29911007 ZNF143 GTRD no Epithelial (MCF-7) 21750172
chr17 29910123 29910751 ZNF143 GTRD no Epithelial (MCF-7) 21750173
chr17 29910154 29910852 ZNF143 GTRD no Epithelial (MCF-7) 21750174
chr17 29910187 29910766 ZNF143 GTRD no Epithelial (MCF-7) 21750175
chr17 29910260 29910778 ZNF143 GTRD no Epithelial (MCF-7) 21750176
chr17 29910270 29910741 ZNF143 GTRD no Epithelial (MCF-7) 21750177
chr17 29910273 29910708 ZNF143 GTRD no Epithelial (MCF-7) 21750178
chr17 29910279 29910802 ZNF143 GTRD no Epithelial (MCF-7) 21750179
chr17 29910352 29910642 ZNF143 GTRD no Epithelial (MCF-7) 21750180
chr17 29910508 29910520 HES5 JASPAR yes 53847615
chr17 29910508 29910520 HES7 JASPAR yes 53847616
Genes associated with rs548115892[chr17:29910520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More