EnhancerDB
  1. Home
  2. SNP
  3. rs548179006[chr1:2227173]
Enhancers that have rs548179006[chr1:2227173]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs548179006[chr1:2227173]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2226394 2230712 TCF7L2 GTRD no Colon (HCT116) 107801818
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801819
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801820
chr1 2227166 2227176 MAX JASPAR yes 26233108
chr1 2227166 2227177 USF1 JASPAR yes 26233109
chr1 2227166 2227178 HES5 JASPAR yes 26233110
chr1 2227167 2227177 CLOCK JASPAR yes 26233111
chr1 2227167 2227177 HEY1 JASPAR yes 26233112
chr1 2227167 2227177 HEY2 JASPAR yes 26233113
chr1 2227167 2227177 MAX JASPAR yes 26233114
chr1 2227168 2227175 USF1 JASPAR yes 26233115
chr1 2227169 2227174 MYC TRANSFAC yes 26233116
chr1 2227169 2227174 USF1 TRANSFAC yes 26233117
chr1 2227169 2227174 USF2 TRANSFAC yes 26233118
chr1 2227170 2227178 MGA JASPAR yes 26233119
chr1 2227170 2227178 TBX1 JASPAR yes 26233120
Genes associated with rs548179006[chr1:2227173], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More