EnhancerDB
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  3. rs548186467[chr3:127466129]
Enhancers that have rs548186467[chr3:127466129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127460425 127476155 enh7513
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs548186467[chr3:127466129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127466123 127466131 TBX5 JASPAR yes 5543714
chr3 127466123 127466132 ZEB1 JASPAR yes 5543715
chr3 127466123 127466135 NHLH1 JASPAR yes 5543716
chr3 127466124 127466134 ID4 JASPAR yes 5543717
chr3 127466124 127466134 NHLH1 JASPAR yes 5543718
chr3 127466124 127466134 TCF3 JASPAR yes 5543719
chr3 127466124 127466134 TCF4 JASPAR yes 5543720
chr3 127466125 127466134 SNAI2 JASPAR yes 5543721
chr3 127466126 127466131 USF2 TRANSFAC yes 5543722
Genes associated with rs548186467[chr3:127466129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More