EnhancerDB
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  3. rs548252988[chr16:88268271]
Enhancers that have rs548252988[chr16:88268271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs548252988[chr16:88268271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88268059 88268375 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735560
chr16 88268075 88268591 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735561
chr16 88268088 88268278 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21735562
chr16 88268157 88268627 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21735563
chr16 88268216 88268496 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735564
chr16 88268223 88268483 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735565
chr16 88268262 88268273 EBF1 JASPAR yes 12268824
chr16 88268270 88268274 H4TF2 TRANSFAC yes 12268825
Genes associated with rs548252988[chr16:88268271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More