EnhancerDB
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  3. rs548262738[chr2:228727135]
Enhancers that have rs548262738[chr2:228727135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228723845 228730696 enh19291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs548262738[chr2:228727135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228727122 228727141 CTCF JASPAR yes 81553509
chr2 228727125 228727139 ZIC1 JASPAR yes 81553511
chr2 228727125 228727140 ZIC4 JASPAR yes 81553512
chr2 228727132 228727141 THAP1 JASPAR yes 81553513
chr2 228727135 228727149 TLX1 JASPAR yes 81553514
Genes associated with rs548262738[chr2:228727135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More