EnhancerDB
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  3. rs548334977[chr17:79021111]
Enhancers that have rs548334977[chr17:79021111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs548334977[chr17:79021111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79021102 79021117 LEF1 JASPAR yes 56300899
chr17 79021103 79021117 TCF7L2 JASPAR yes 56300900
chr17 79021103 79021118 PRDM1 JASPAR yes 56300901
chr17 79021103 79021118 STAT2 JASPAR yes 56300902
Genes associated with rs548334977[chr17:79021111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More