EnhancerDB
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  3. rs548342198[chr5:176415131]
Enhancers that have rs548342198[chr5:176415131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 176410422 176427455 enh8889
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Uterus Stomach
Transcript factors that have rs548342198[chr5:176415131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 176415126 176415141 MEF2C JASPAR yes 68072559
chr5 176415129 176415144 FOXP1 JASPAR yes 68072560
chr5 176415130 176415145 FOXP1 JASPAR yes 68072561
chr5 176415130 176415151 IRF1 JASPAR yes 68072562
chr5 176415131 176415146 FOXP1 JASPAR yes 68072563
chr5 176415131 176415152 IRF1 JASPAR yes 68072564
Genes associated with rs548342198[chr5:176415131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More