EnhancerDB
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  3. rs548367561[chr1:3239797]
Enhancers that have rs548367561[chr1:3239797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548367561[chr1:3239797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3239790 3239799 SNAI2 JASPAR yes 26279789
chr1 3239790 3239800 FIGLA JASPAR yes 26279790
chr1 3239790 3239800 TCF3 JASPAR yes 26279791
chr1 3239790 3239800 TCF4 JASPAR yes 26279792
chr1 3239791 3239809 ESR1 JASPAR yes 26279793
chr1 3239792 3239801 ZEB1 JASPAR yes 26279794
chr1 3239794 3239799 SP1 TRANSFAC yes 26279795
Genes associated with rs548367561[chr1:3239797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More