EnhancerDB
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  3. rs548377174[chr1:29301312]
Enhancers that have rs548377174[chr1:29301312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29289305 29304099 enh26594
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (A673) Colon (HCT116) Adrenal Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs548377174[chr1:29301312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29301294 29301312 IRF2 JASPAR yes 27795855
chr1 29301295 29301316 IRF1 JASPAR yes 27795856
chr1 29301297 29301312 STAT2 JASPAR yes 27795857
chr1 29301298 29301312 STAT1 JASPAR yes 27795858
chr1 29301299 29301313 IRF7 JASPAR yes 27795860
chr1 29301299 29301314 IRF9 JASPAR yes 27795861
chr1 29301300 29301320 RREB1 JASPAR yes 27795862
chr1 29301300 29301321 IRF1 JASPAR yes 27795863
chr1 29301301 29301316 FOXP1 JASPAR yes 27795865
chr1 29301301 29301322 IRF1 JASPAR yes 27795866
chr1 29301302 29301317 STAT2 JASPAR yes 27795867
chr1 29301305 29301317 IRF1 JASPAR yes 27795868
chr1 29301306 29301327 IRF1 JASPAR yes 27795869
chr1 29301307 29301313 TCF4 TRANSFAC yes 27795870
chr1 29301307 29301322 FOXP1 JASPAR yes 27795871
chr1 29301308 29301319 FOXP2 JASPAR yes 27795872
chr1 29301308 29301320 FOXC2 JASPAR yes 27795873
chr1 29301308 29301323 STAT2 JASPAR yes 27795874
chr1 29301309 29301324 FOXP1 JASPAR yes 27795875
chr1 29301312 29301327 FOXP1 JASPAR yes 27795876
Genes associated with rs548377174[chr1:29301312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More