EnhancerDB
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  3. rs548398661[chr16:394213]
Enhancers that have rs548398661[chr16:394213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs548398661[chr16:394213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 394203 394220 RARA JASPAR yes 9107599
chr16 394211 394224 NR2F1 JASPAR yes 9107600
Genes associated with rs548398661[chr16:394213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More