EnhancerDB
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  3. rs548403569[chr17:62627886]
Enhancers that have rs548403569[chr17:62627886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62614185 62639973 enh32279
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs548403569[chr17:62627886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62627871 62627886 FOXA1 JASPAR yes 55304745
chr17 62627881 62627895 POU4F1 JASPAR yes 55304750
chr17 62627881 62627897 POU4F2 JASPAR yes 55304751
chr17 62627881 62627897 POU4F3 JASPAR yes 55304752
chr17 62627884 62627894 LHX6 JASPAR yes 55304753
chr17 62627884 62627894 MNX1 JASPAR yes 55304754
chr17 62627884 62627894 POU6F1 JASPAR yes 55304755
chr17 62627885 62627893 LMX1A JASPAR yes 55304756
chr17 62627885 62627893 LMX1B JASPAR yes 55304757
chr17 62627885 62627893 NKX6-1 JASPAR yes 55304758
chr17 62627885 62627893 NKX6-2 JASPAR yes 55304759
chr17 62627885 62627893 VAX1 JASPAR yes 55304760
chr17 62627885 62627893 VAX2 JASPAR yes 55304761
chr17 62627885 62627893 VSX1 JASPAR yes 55304762
chr17 62627885 62627893 VSX2 JASPAR yes 55304763
Genes associated with rs548403569[chr17:62627886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More