EnhancerDB
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  3. rs548524309[chr1:22581430]
Enhancers that have rs548524309[chr1:22581430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs548524309[chr1:22581430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22581428 22581436 MGA JASPAR yes 27355287
chr1 22581428 22581436 TBX15 JASPAR yes 27355288
chr1 22581428 22581436 TBX1 JASPAR yes 27355289
chr1 22581428 22581436 TBX4 JASPAR yes 27355290
chr1 22581428 22581436 TBX5 JASPAR yes 27355291
chr1 22581428 22581442 RXRB JASPAR yes 27355292
chr1 22581428 22581442 RXRG JASPAR yes 27355293
chr1 22581429 22581439 NKX2-3 JASPAR yes 27355294
chr1 22581430 22581439 NKX2-8 JASPAR yes 27355295
Genes associated with rs548524309[chr1:22581430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More