EnhancerDB
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  3. rs548530748[chr1:2226625]
Enhancers that have rs548530748[chr1:2226625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs548530748[chr1:2226625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2226394 2230712 TCF7L2 GTRD no Colon (HCT116) 107801818
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801819
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801820
chr1 2226623 2226635 NHLH1 JASPAR yes 26233004
chr1 2226624 2226633 SNAI2 JASPAR yes 26233005
chr1 2226624 2226634 ID4 JASPAR yes 26233006
chr1 2226624 2226634 NHLH1 JASPAR yes 26233007
chr1 2226624 2226634 TCF3 JASPAR yes 26233008
chr1 2226624 2226634 TCF4 JASPAR yes 26233009
Genes associated with rs548530748[chr1:2226625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More