EnhancerDB
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  3. rs548548024[chr1:206907280]
Enhancers that have rs548548024[chr1:206907280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206905983 206916695 enh899
Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs548548024[chr1:206907280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206906674 206908566 ZNF143 GTRD no Epithelial (MCF-7) 21372627
chr1 206906963 206908427 ZNF143 GTRD no Epithelial (MCF-7) 21372628
chr1 206907082 206914424 ZNF274 GTRD no Blood (GM12878) 107863444
chr1 206907099 206908445 ZNF143 GTRD no Epithelial (MCF-7) 21372629
chr1 206907103 206908136 ZNF143 GTRD no Epithelial (MCF-7) 21372630
chr1 206907105 206908717 ZNF143 GTRD no Epithelial (MCF-7) 21372631
chr1 206907107 206908314 ZNF143 GTRD no Epithelial (MCF-7) 21372632
chr1 206907138 206908413 ZNF143 GTRD no Epithelial (MCF-7) 21372633
chr1 206907149 206908424 ZNF143 GTRD no Epithelial (MCF-7) 21372634
chr1 206907151 206908231 ZNF274 GTRD no Cervix (HeLa-S3) 21372635
chr1 206907222 206908230 ZNF143 GTRD no Epithelial (MCF-7) 21372636
chr1 206907247 206908084 ZNF143 GTRD no Epithelial (MCF-7) 21372637
chr1 206907266 206907283 RXRA JASPAR yes 34823389
chr1 206907267 206908176 ZNF143 GTRD no Epithelial (MCF-7) 21372638
chr1 206907277 206907289 INSM1 JASPAR yes 34823390
chr1 206907279 206907293 PLAG1 JASPAR yes 34823391
Genes associated with rs548548024[chr1:206907280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More