EnhancerDB
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  3. rs548553577[chr17:39834476]
Enhancers that have rs548553577[chr17:39834476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs548553577[chr17:39834476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39834001 39835444 POLR2A UCSC Txn Factor no Conserved 108259514
chr17 39834441 39835281 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758240
chr17 39834441 39835281 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259515
chr17 39834463 39834482 PAX5 JASPAR yes 54272375
chr17 39834463 39835435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758241
chr17 39834463 39835435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259516
chr17 39834466 39835199 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758242
chr17 39834466 39835199 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259517
Genes associated with rs548553577[chr17:39834476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More