EnhancerDB
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  3. rs548557946[chr5:180256251]
Enhancers that have rs548557946[chr5:180256251]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 180248485 180261855 enh8910
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Thyroid Breast Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Heart
chr5 180256099 180256444 vista50411
VISTA
Transcript factors that have rs548557946[chr5:180256251]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 180256238 180256253 NR2C2 JASPAR yes 68225133
chr5 180256238 180256253 NR2C2 JASPAR yes 70775019
chr5 180256244 180256259 HNF4A JASPAR yes 68225134
chr5 180256244 180256259 HNF4A JASPAR yes 70775020
chr5 180256245 180256259 RXRG JASPAR yes 68225135
chr5 180256245 180256259 RXRG JASPAR yes 70775021
chr5 180256245 180256260 HNF4G JASPAR yes 68225136
chr5 180256245 180256260 NR2C2 JASPAR yes 68225137
chr5 180256245 180256260 HNF4G JASPAR yes 70775022
chr5 180256245 180256260 NR2C2 JASPAR yes 70775023
chr5 180256249 180256255 SOX10 JASPAR yes 68225138
chr5 180256249 180256255 SOX10 JASPAR yes 70775024
Genes associated with rs548557946[chr5:180256251], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More