EnhancerDB
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  3. rs548594444[chr17:70423300]
Enhancers that have rs548594444[chr17:70423300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 70423161 70423493 vista25813
VISTA
Transcript factors that have rs548594444[chr17:70423300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70422844 70423307 ZNF274 GTRD no Liver (HepG2) 21785126
chr17 70422844 70423307 ZNF274 GTRD no Liver (HepG2) 108290137
chr17 70423053 70423389 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785127
chr17 70423053 70423389 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108290138
chr17 70423078 70423368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785128
chr17 70423078 70423368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108290139
chr17 70423084 70423491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785129
chr17 70423084 70423491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290140
chr17 70423093 70423353 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785130
chr17 70423093 70423353 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108290141
chr17 70423100 70423440 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785131
chr17 70423100 70423440 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108290142
chr17 70423122 70423346 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785132
chr17 70423122 70423346 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108290143
chr17 70423123 70423413 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785133
chr17 70423123 70423413 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108290144
chr17 70423220 70423620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785134
chr17 70423220 70423620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290145
chr17 70423271 70424174 ZNF274 GTRD no Blood (GM12878) 21785135
chr17 70423271 70424174 ZNF274 GTRD no Blood (GM12878) 108290146
chr17 70423285 70423300 FOXA1 JASPAR yes 21287741
chr17 70423285 70423300 FOXA1 JASPAR yes 55786990
chr17 70423289 70423300 FOXA1 JASPAR yes 21287743
chr17 70423289 70423300 FOXA1 JASPAR yes 55786992
Genes associated with rs548594444[chr17:70423300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More