EnhancerDB
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  3. rs548618550[chr17:79398959]
Enhancers that have rs548618550[chr17:79398959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548618550[chr17:79398959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79398644 79399215 ZNF274 GTRD no Liver (HepG2) 21797976
chr17 79398644 79399215 ZNF274 GTRD no Liver (HepG2) 108309616
chr17 79398692 79399191 ZNF274 GTRD no Liver (HepG2) 21797977
chr17 79398692 79399191 ZNF274 GTRD no Liver (HepG2) 108309617
chr17 79398783 79399616 TCF7L2 GTRD no Colon (HCT116) 21797978
chr17 79398783 79399616 TCF7L2 GTRD no Colon (HCT116) 108309618
chr17 79398939 79398959 RREB1 JASPAR yes 56326973
chr17 79398940 79398960 RREB1 JASPAR yes 56326974
chr17 79398942 79398962 RREB1 JASPAR yes 56326975
chr17 79398945 79398965 RREB1 JASPAR yes 56326976
chr17 79398947 79398967 RREB1 JASPAR yes 56326977
chr17 79398949 79398969 RREB1 JASPAR yes 56326978
chr17 79398952 79398972 RREB1 JASPAR yes 56326979
chr17 79398954 79398974 RREB1 JASPAR yes 56326981
chr17 79398956 79398971 RUNX2 JASPAR yes 56326982
Genes associated with rs548618550[chr17:79398959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More