EnhancerDB
  1. Home
  2. SNP
  3. rs548625886[chr1:235455936]
Enhancers that have rs548625886[chr1:235455936]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235448657 235464435 enh12801
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs548625886[chr1:235455936]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235455927 235455942 FOXP1 JASPAR yes 36361465
chr1 235455928 235455943 FOXP1 JASPAR yes 36361466
chr1 235455929 235455944 FOXP1 JASPAR yes 36361467
chr1 235455930 235455945 FOXP1 JASPAR yes 36361468
chr1 235455931 235455946 FOXP1 JASPAR yes 36361469
chr1 235455931 235455952 IRF1 JASPAR yes 36361470
chr1 235455932 235455947 FOXP1 JASPAR yes 36361471
chr1 235455932 235455953 IRF1 JASPAR yes 36361472
chr1 235455933 235455948 FOXP1 JASPAR yes 36361473
Genes associated with rs548625886[chr1:235455936], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More