EnhancerDB
  1. Home
  2. SNP
  3. rs548665598[chr6:110838807]
Enhancers that have rs548665598[chr6:110838807]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548665598[chr6:110838807]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110838794 110838808 RXRB JASPAR yes 104292579
chr6 110838794 110838808 RXRG JASPAR yes 104292580
chr6 110838802 110838814 FOXC2 JASPAR yes 104292581
chr6 110838803 110838815 FOXI1 JASPAR yes 104292582
Genes associated with rs548665598[chr6:110838807], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More