EnhancerDB
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  3. rs548726838[chr19:2490768]
Enhancers that have rs548726838[chr19:2490768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs548726838[chr19:2490768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2490428 2492348 ZNF143 GTRD no Epithelial (MCF-7) 21835544
chr19 2490457 2492100 AR GTRD no Prostate (PC-3) 21835545
chr19 2490539 2491965 ZNF274 GTRD no Cervix (HeLa-S3) 21835546
chr19 2490555 2491954 ZNF274 GTRD no Cervix (HeLa-S3) 21835547
chr19 2490559 2492025 ZNF274 GTRD no Cervix (HeLa-S3) 21835548
chr19 2490573 2492184 ZNF274 GTRD no Cervix (HeLa-S3) 21835549
chr19 2490587 2491751 ZNF274 GTRD no Bone Marrow (K562) 21835550
chr19 2490645 2491031 ZNF274 GTRD no Liver (HepG2) 21835551
chr19 2490661 2492021 ZNF274 GTRD no Cervix (HeLa-S3) 21835552
chr19 2490671 2492011 ZNF274 GTRD no Cervix (HeLa-S3) 21835553
chr19 2490697 2491150 MEF2B GTRD no Blood (Karpas-422) 21835554
chr19 2490703 2491172 ZNF274 GTRD no Bone Marrow (K562) 21835555
chr19 2490734 2492040 ZNF274 GTRD no Cervix (HeLa-S3) 21835556
chr19 2490755 2490770 TP53 JASPAR yes 112065839
chr19 2490761 2491312 ZNF274 GTRD no Liver (HepG2) 21835557
chr19 2490762 2490782 TP63 JASPAR yes 112065840
chr19 2490763 2490781 TP53 JASPAR yes 112065841
chr19 2490763 2490781 TP63 JASPAR yes 112065842
chr19 2490764 2490779 TP53 JASPAR yes 112065843
chr19 2490768 2490779 GCM1 JASPAR yes 112065844
Genes associated with rs548726838[chr19:2490768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More