EnhancerDB
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  3. rs548776255[chr19:13187673]
Enhancers that have rs548776255[chr19:13187673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs548776255[chr19:13187673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13187611 13188359 TCF7L2 GTRD no Colon (HCT116) 21850676
chr19 13187611 13188359 TCF7L2 GTRD no Colon (HCT116) 108388762
chr19 13187668 13187683 TFAP2C JASPAR yes 112508771
chr19 13187670 13187682 TFAP2A JASPAR yes 112508772
Genes associated with rs548776255[chr19:13187673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More