EnhancerDB
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  3. rs548801550[chr1:2219417]
Enhancers that have rs548801550[chr1:2219417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs548801550[chr1:2219417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2219404 2219425 IRF1 JASPAR yes 26232044
chr1 2219406 2219421 FOXP1 JASPAR yes 26232045
chr1 2219407 2219428 ZNF263 JASPAR yes 26232046
chr1 2219410 2219431 IRF1 JASPAR yes 26232047
chr1 2219411 2219426 FOXP1 JASPAR yes 26232048
chr1 2219411 2219432 IRF1 JASPAR yes 26232049
chr1 2219415 2219436 IRF1 JASPAR yes 26232050
chr1 2219417 2219432 PRDM1 JASPAR yes 26232051
chr1 2219417 2219432 STAT2 JASPAR yes 26232052
Genes associated with rs548801550[chr1:2219417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More