EnhancerDB
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  3. rs548822412[chr1:16434972]
Enhancers that have rs548822412[chr1:16434972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs548822412[chr1:16434972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16434962 16434977 SOX21 JASPAR yes 27025262
chr1 16434965 16434974 POU3F4 JASPAR yes 27025264
chr1 16434965 16434974 POU5F1B JASPAR yes 27025265
chr1 16434969 16434978 SOX9 JASPAR yes 27025266
chr1 16434969 16434988 RFX2 JASPAR yes 27025267
Genes associated with rs548822412[chr1:16434972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More