EnhancerDB
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  3. rs548824658[chr9:116343312]
Enhancers that have rs548824658[chr9:116343312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116325685 116352877 enh25925
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs548824658[chr9:116343312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116343296 116343316 RREB1 JASPAR yes 86426714
chr9 116343300 116343320 RREB1 JASPAR yes 86426715
chr9 116343301 116343321 RREB1 JASPAR yes 86426717
chr9 116343301 116343322 ZNF263 JASPAR yes 86426718
chr9 116343303 116343317 PLAG1 JASPAR yes 86426719
chr9 116343307 116343324 RARA JASPAR yes 86426721
chr9 116343307 116343324 RXRA JASPAR yes 86426722
Genes associated with rs548824658[chr9:116343312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More