EnhancerDB
  1. Home
  2. SNP
  3. rs548862942[chr19:7483140]
Enhancers that have rs548862942[chr19:7483140]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7469445 7495915 enh17893
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs548862942[chr19:7483140]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7481922 7484097 TCF7L2 GTRD no Colon (HCT116) 21846565
chr19 7481922 7484097 TCF7L2 GTRD no Colon (HCT116) 108381174
chr19 7482027 7484385 ZNF274 GTRD no Bone Marrow (K562) 108381175
chr19 7482469 7483762 TCF7L2 GTRD no Colon (HCT116) 21846566
chr19 7482469 7483762 TCF7L2 GTRD no Colon (HCT116) 108381176
chr19 7482513 7483896 TCF7L2 GTRD no Colon (HCT116) 21846567
chr19 7482513 7483896 TCF7L2 GTRD no Colon (HCT116) 108381177
chr19 7482543 7484127 TCF7L2 GTRD no Colon (HCT116) 21846568
chr19 7482543 7484127 TCF7L2 GTRD no Colon (HCT116) 108381178
chr19 7482563 7484061 TCF7L2 GTRD no Colon (HCT116) 21846569
chr19 7482563 7484061 TCF7L2 GTRD no Colon (HCT116) 108381179
chr19 7482742 7484100 ZNF274 GTRD no Bone Marrow (K562) 108381180
chr19 7482872 7484379 ZNF274 GTRD no Cervix (HeLa-S3) 21846570
chr19 7482872 7484379 ZNF274 GTRD no Cervix (HeLa-S3) 108381181
chr19 7483030 7484248 ZNF274 GTRD no Bone Marrow (K562) 108381182
chr19 7483065 7484016 ZNF274 GTRD no Bone Marrow (K562) 108381183
chr19 7483100 7484213 ZNF274 GTRD no Cervix (HeLa-S3) 21846571
chr19 7483100 7484213 ZNF274 GTRD no Cervix (HeLa-S3) 108381184
chr19 7483107 7484337 ZNF274 GTRD no Cervix (HeLa-S3) 21846572
chr19 7483107 7484337 ZNF274 GTRD no Cervix (HeLa-S3) 108381185
chr19 7483113 7484317 ZNF274 GTRD no Bone Marrow (K562) 108381186
chr19 7483120 7483140 RREB1 JASPAR yes 112326374
chr19 7483122 7483142 RREB1 JASPAR yes 112326375
chr19 7483128 7483148 RREB1 JASPAR yes 112326377
chr19 7483133 7483153 RREB1 JASPAR yes 112326378
chr19 7483138 7483158 RREB1 JASPAR yes 112326379
chr19 7483139 7483160 IRF1 JASPAR yes 112326380
chr19 7483140 7483146 TCF4 TRANSFAC yes 112326381
chr19 7483140 7483155 FOXP1 JASPAR yes 112326382
chr19 7483140 7484236 ZNF274 GTRD no Bone Marrow (K562) 108381187
Genes associated with rs548862942[chr19:7483140], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More