EnhancerDB
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  3. rs548885708[chr6:39175619]
Enhancers that have rs548885708[chr6:39175619]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 39165525 39196155 enh23215
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Liver Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs548885708[chr6:39175619]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 39175613 39175627 GLIS3 JASPAR yes 101515681
chr6 39175615 39175626 TFAP2A JASPAR yes 101515682
chr6 39175615 39175626 TFAP2B JASPAR yes 101515683
chr6 39175615 39175626 TFAP2C JASPAR yes 101515684
chr6 39175616 39175625 TFAP2A JASPAR yes 101515685
Genes associated with rs548885708[chr6:39175619], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More