EnhancerDB
  1. Home
  2. SNP
  3. rs548909226[chr19:5035224]
Enhancers that have rs548909226[chr19:5035224]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5019125 5039375 enh4975
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs548909226[chr19:5035224]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5035220 5035229 SNAI2 JASPAR yes 112208187
chr19 5035220 5035230 TCF4 JASPAR yes 112208188
chr19 5035222 5035231 ZEB1 JASPAR yes 112208189
chr19 5035223 5035231 TBX15 JASPAR yes 112208190
chr19 5035224 5035229 SP1 TRANSFAC yes 112208191
Genes associated with rs548909226[chr19:5035224], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More