EnhancerDB
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  3. rs548936608[chr15:40343020]
Enhancers that have rs548936608[chr15:40343020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548936608[chr15:40343020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40341855 40343296 AR GTRD no Prostate (PC-3) 21649398
chr15 40342295 40343204 ZNF143 GTRD no Epithelial (MCF-7) 21649399
chr15 40342309 40343384 ZNF143 GTRD no Epithelial (MCF-7) 21649400
chr15 40342310 40343211 ZNF143 GTRD no Epithelial (MCF-7) 21649401
chr15 40343000 40343020 RREB1 JASPAR yes 22923308
chr15 40343001 40343021 RREB1 JASPAR yes 22923309
chr15 40343002 40343022 RREB1 JASPAR yes 22923311
chr15 40343003 40343023 RREB1 JASPAR yes 22923312
chr15 40343004 40343024 RREB1 JASPAR yes 22923313
chr15 40343005 40343025 RREB1 JASPAR yes 22923314
chr15 40343007 40343027 RREB1 JASPAR yes 22923315
chr15 40343008 40343028 RREB1 JASPAR yes 22923316
chr15 40343010 40343030 RREB1 JASPAR yes 22923317
chr15 40343011 40343031 RREB1 JASPAR yes 22923318
chr15 40343013 40343033 RREB1 JASPAR yes 22923319
chr15 40343014 40343024 ZNF740 JASPAR yes 22923320
chr15 40343015 40343035 RREB1 JASPAR yes 22923321
chr15 40343016 40343026 ZNF740 JASPAR yes 22923322
chr15 40343017 40343037 RREB1 JASPAR yes 22923323
chr15 40343018 40343032 PLAG1 JASPAR yes 22923324
chr15 40343020 40343040 RREB1 JASPAR yes 22923325
Genes associated with rs548936608[chr15:40343020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More