EnhancerDB
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  3. rs548959981[chr1:118199892]
Enhancers that have rs548959981[chr1:118199892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs548959981[chr1:118199892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118199571 118199967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21334631
chr1 118199591 118199915 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334632
chr1 118199637 118200093 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334634
chr1 118199652 118200128 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21334636
chr1 118199693 118200037 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21334637
chr1 118199698 118199982 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334638
chr1 118199700 118199980 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334639
chr1 118199878 118199893 STAT1 JASPAR yes 31890004
Genes associated with rs548959981[chr1:118199892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More