EnhancerDB
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  3. rs548968929[chr1:202062850]
Enhancers that have rs548968929[chr1:202062850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs548968929[chr1:202062850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202061920 202063680 ZNF274 GTRD no Cervix (HeLa-S3) 21367016
chr1 202062502 202063886 ZNF143 GTRD no Epithelial (MCF-7) 21367020
chr1 202062598 202063820 ZNF143 GTRD no Epithelial (MCF-7) 21367021
chr1 202062624 202063829 ZNF143 GTRD no Epithelial (MCF-7) 21367022
chr1 202062665 202063876 ZNF143 GTRD no Epithelial (MCF-7) 21367023
chr1 202062685 202063624 ZNF143 GTRD no Epithelial (MCF-7) 21367024
chr1 202062692 202063562 ZNF274 GTRD no Bone Marrow (K562) 21367025
chr1 202062801 202063593 ZNF274 GTRD no Cervix (HeLa-S3) 21367026
chr1 202062809 202063589 ZNF274 GTRD no Cervix (HeLa-S3) 21367027
chr1 202062825 202063605 ZNF274 GTRD no Bone Marrow (K562) 21367028
chr1 202062839 202062851 GRHL1 JASPAR yes 34552955
chr1 202062840 202062850 TFCP2 JASPAR yes 34552957
chr1 202062848 202062858 MZF1 JASPAR yes 34552958
Genes associated with rs548968929[chr1:202062850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More