EnhancerDB
  1. Home
  2. SNP
  3. rs548973568[chr1:3253567]
Enhancers that have rs548973568[chr1:3253567]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548973568[chr1:3253567]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3253560 3253580 TP63 JASPAR yes 26281726
chr1 3253561 3253579 TP53 JASPAR yes 26281727
chr1 3253561 3253579 TP63 JASPAR yes 26281728
chr1 3253561 3253579 TP73 JASPAR yes 26281729
chr1 3253562 3253577 TP53 JASPAR yes 26281730
chr1 3253562 3253582 TP53 JASPAR yes 26281731
chr1 3253563 3253578 TP53 JASPAR yes 26281732
chr1 3253567 3253580 ZBTB18 JASPAR yes 26281733
Genes associated with rs548973568[chr1:3253567], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More