EnhancerDB
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  3. rs548979979[chr16:2173956]
Enhancers that have rs548979979[chr16:2173956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2169469 2181557 enh3844
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs548979979[chr16:2173956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2172975 2176695 ZNF143 GTRD no Epithelial (MCF-7) 108172258
chr16 2173580 2176864 ZNF143 GTRD no Epithelial (MCF-7) 108172259
chr16 2173941 2173960 CTCF JASPAR yes 9170981
chr16 2173952 2173956 H4TF2 TRANSFAC yes 9170982
chr16 2173954 2173960 MZF1 JASPAR yes 9170983
Genes associated with rs548979979[chr16:2173956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More