EnhancerDB
  1. Home
  2. SNP
  3. rs548987153[chr1:10952490]
Enhancers that have rs548987153[chr1:10952490]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs548987153[chr1:10952490]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10952481 10952490 SNAI2 JASPAR yes 26757173
chr1 10952481 10952491 ID4 JASPAR yes 26757174
chr1 10952481 10952491 TCF3 JASPAR yes 26757175
chr1 10952481 10952491 TCF4 JASPAR yes 26757176
Genes associated with rs548987153[chr1:10952490], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More